SEISMIC-RNA Report

⇅
pri-miRNA-SNP-1_GSNP
⇅ abundance_clustered
Sample: pri-miRNA-SNP-1_GSNP | Reference: hsa-mir-645 | Region: pri-mirna | Branches: []
⇅ pri-mirna__cluster-3-1-6
Sample: pri-miRNA-SNP-1_GSNP | Reference: hsa-mir-645 | Region: full | Branches: []
GGAC205CGCUC05AGU165UUA195AACA03UUCUC53AGUCAUUAAA155AC06AUU145GAUUCC57UAACA08GUC130UAU58UAGUA95CCUGAGG021AGAAA175UCAGA180UGGGA185CAAAA091GAG022ACACUACG210AUU51AGCCGAUU02GGC200UGUGU25AGCGC45UGCGCGUAC55G160GCCGC170GGCCG40CGUAGC150CGGCCGA56UGCUA140CGCGA07UGC135UGUGGCCGCG105GCUGG110UGC125GCGCGCU115ACGAUGCAU100C09GCGG512CAUCGUA225C1AGAG5AGUAC10UCAAG230 0 1 Reactivity
⇅ pri-mirna__cluster-3-2-2
Sample: pri-miRNA-SNP-1_GSNP | Reference: hsa-mir-645 | Region: full | Branches: []
GACCGC54CACUC05AC200CGUGC205CAU20GUUGU52GGUCA03UGCUC35AC55CAAUGCA56AAAA190GA07GUU165UUGCC170AGAAA175UCAGA180UGAACAAA155AAGAG160CUAC09UCGAGAG022ACACG5CAUUG210AUC01GUAAUGCU15G40GCAUCGCGCGUAUA195GCCGC06GGCUA185CGCGUGCGC57GUAA08UGUGC150CGU58ACGAU145GCCGAUGCUA140A59UCGCGGUGC135U001GCGUAGUG501C130GUGCUGG011UGC125GCGCGCU511AUG120G512CAUCGUA225C1AGAAAG230 0 1 Reactivity
⇅ pri-mirna__cluster-3-3-2
Sample: pri-miRNA-SNP-1_GSNP | Reference: hsa-mir-645 | Region: full | Branches: []
AGUAAUGCA56AAAA190GA07GUU165UUGCC170AGAAA175UCAGA180UGAACA08UAAA155AAGAG160CUAC09UC130GUGAGCA225C502CAG220AG012AUCAG215U51CAU02GUUUC50ACCCA03UUCUC53AGUCGCAUG5C10GCCGC06GGCUA185CGCGUGCGC57GUAGUGC150CGU58ACGAU145GCCGAUGCUA140A59UCGCGGUGC135U001GCGUAGUG501UGCCGG011UGC125GCGCGCU511AUG120GCGUC002GGCUAGCAUGCUAAUGCGC55AUGCU52AGCGC45UGGCCG40C1AA195AAAG230 0 1 Reactivity
⇅ profile_clustered-3-x_m-ratio-q0
Sample: pri-miRNA-SNP-1_GSNP | Reference: hsa-mir-645 | Region: pri-mirna | Branches: []
⇅
pri-miRNA-SNP-1_WT
⇅ abundance_clustered
Sample: pri-miRNA-SNP-1_WT | Reference: hsa-mir-645 | Region: pri-mirna | Branches: []
⇅ pri-mirna__cluster-3-1-0
Sample: pri-miRNA-SNP-1_WT | Reference: hsa-mir-645 | Region: full | Branches: []
AC205U02UUUUC05AGU165UUGGA185CAAAA190GGCA03UUCUC53AGUCAUUAAA155AC06AUU145GAUUUUAUGCUC130U58UAGUA95CCUGAGG021AGAAA175UCAGA180UA195AAGAG022ACACUACG210AUGUU51AGCCGAUGCU25AGCGC45UGCGCGUAC55G160CGC071GGCGC002CGGCCG40CGUAGC150CGGCCGA56UGCUA140CGCGA07UGC135CGC57GUAAUCG110A08UGCGCCGCG105GC125GCGCGCU115ACGAUGCAU100C09GCGG512CAUCGUA225C1AGAG5AGUAC10UCAAG230 0 1 Reactivity
⇅ pri-mirna__cluster-3-2-2
Sample: pri-miRNA-SNP-1_WT | Reference: hsa-mir-645 | Region: full | Branches: []
AC205UUUUC05ACCUC55CUCCA03UUCUC53AGUCAUGCA56A195AAA07AAAA190UAACAGCC170AGAAA175UCAGA180UCUAC09UC130CUGAGAGAG160AGGGAG022ACACUACG210AUGUU51AGCCGAUU02GGCU25AGCGC45UGGC200CGC06GGCCG40GCUGCGCGGCUA185UGCGC57GA08UGUGC150CGAUA155UAU165U58ACGAU145GCCGAUGCUA140A59UCGCGGUGC135U001GCGUAGUG501UGCCGG011UGC125GCGCGCU511AUG120G512CAUCGUA225C1AGAG5AGUAC10UCAAG230 0 1 Reactivity
⇅ pri-mirna__cluster-3-3-2
Sample: pri-miRNA-SNP-1_WT | Reference: hsa-mir-645 | Region: full | Branches: []
CCAGCUC35AU02UUUGU25GACUC05AAAAA190GAUUAAA155AC06AUU145GAUUUUAUGCUC130U58UAGUA95CCGAGGCC071AGAAA175UCAGA081UGCGUAG022ACACG5CAUGCUG40AUC01GUAGUU51A30GCAUCGGCC54GCGCGCGUAC55G160GCU165A185UGUGCGUAGC150CGGCCGA56UGCUA140CGCGA07UGC135CGC57GUAAUCG110A08UGCGCCGCG105GC125GCGCGCU511AUG120CGAUGCAU100C09GCGGCGC205C002GG512CAUCGUA225C1AGAA195AAAUUG210AUCAAG230 0 1 Reactivity
⇅ profile_clustered-3-x_m-ratio-q0
Sample: pri-miRNA-SNP-1_WT | Reference: hsa-mir-645 | Region: pri-mirna | Branches: []
⇅
pri-miRNA-SNP-2_GSNP
⇅ abundance_clustered
Sample: pri-miRNA-SNP-2_GSNP | Reference: hsa-mir-645 | Region: pri-mirna | Branches: []
⇅ pri-mirna__cluster-3-1-5
Sample: pri-miRNA-SNP-2_GSNP | Reference: hsa-mir-645 | Region: full | Branches: []
GGAC205CGCUC05AGU165UUA195AACA03UUCUC53AGUCAUUAAA155AC06AUU145GAUUUUACA08GUC130U58UAGUA95CCUGAGG021AGAAA175UCAGA180UGGGA185CAAAA091GAG022ACACUACG210AUU51AGCCGAUU02GGC200UGUGU25AGCGC45UGCGCGUAC55G160GCCGC170GGCCG40CGUAGC150CGGCCGA56UGCUA140CGCGA07UGC135CGC57GUAAUGCCGCG105GCUGG110UGC125GCGCGCU115ACGAUGCAU100C09GCGG512CAUCGUA225C1AGAG5AGUAC10UCAAG230 0 1 Reactivity
⇅ pri-mirna__cluster-3-2-2
Sample: pri-miRNA-SNP-2_GSNP | Reference: hsa-mir-645 | Region: full | Branches: []
AGUAAUGCA56AAAA190GA07GUU165UUGCC170AGAAA175UCAGA180UGAACA08UAAA155AAGAG160CUAC09UC130GUGAGCA225C502CAG220AG012AUCAG215U51CACCUUUCA03UUCUC53AGUCGCAUG5C10GCCGC06GGCUA185CGCGUGCGC57GUAGUGC150CGU58ACGAU145GCCGAUGCUA140A59UCGCGGUGC135U001GCGUAGUG501UGCCGG011UGC125GCGCGCU511AUG120GCGUC002GGCUAGCAUGCUAAUGCGC55AUU02AGC50GCU52AGCGC45UGGCCG40C1AA195AAAG230 0 1 Reactivity
⇅ pri-mirna__cluster-3-3-4
Sample: pri-miRNA-SNP-2_GSNP | Reference: hsa-mir-645 | Region: full | Branches: []
AGUAAUUGU52GGUCA30UGCUAUGCA56AAAA190GA07GUUCC57UAACA08UAAA155AAGAG160AAGAAA175UCAGA180UGCUAC09UC130UGU511UGAGG120AGU165UUGCA225C502CAG220AG012AUCAG215GCAUG5C10AUGCU51G40GCAUCGU02AGC35GCCGC06GGCUA185CGCGGUGC150CGGC170GCU58ACGAU145GCCGAUGCUA140A59UCGCGGUGC135U001GCGUAGUG501UGCCGGUG011C125GCGCGCGCGUC002GGCUAGCAUGCUAC1ACGC45CACUC50ACCUC55CUA195AAAG230 0 1 Reactivity
⇅ profile_clustered-3-x_m-ratio-q0
Sample: pri-miRNA-SNP-2_GSNP | Reference: hsa-mir-645 | Region: pri-mirna | Branches: []
⇅
pri-miRNA-SNP-2_WT
⇅ abundance_clustered
Sample: pri-miRNA-SNP-2_WT | Reference: hsa-mir-645 | Region: pri-mirna | Branches: []
⇅ pri-mirna__cluster-3-1-0
Sample: pri-miRNA-SNP-2_WT | Reference: hsa-mir-645 | Region: full | Branches: []
AC205U02UUUUC05AGU165UUGGA185CAAAA190GGCA03UUCUC53AGUCAUUAAA155AC06AUU145GAUUUUAUGCUC130U58UAGUA95CCGAGAGAAA175UCAGA180UA195AAGAG022ACACUACG210AUGUU51AGCCGAUGCU25AGCGC45UGCGCGUAC55G160CGC071GGCGC002CGGCCG40CGUAGC150CGGCCGA56UGCUA140CGCGA07UGC135CGC57GUAAUCG110A08UGCGCCGCG105GC125GCGCGCU115AUG120CGAUGCAU100C09GCGG512CAUCGUA225C1AGAG5AGUAC10UCAAG230 0 1 Reactivity
⇅ pri-mirna__cluster-3-2-3
Sample: pri-miRNA-SNP-2_WT | Reference: hsa-mir-645 | Region: full | Branches: []
AC205UUUUC05ACCUC55CUCCA03UUCUC53AGUCAUGCA56A195AAA07AAAA190UAACAGCC170AGAAA175UCAGA180UCUAC09UC130CUUGAGG120AGAG160AGGGAG022ACACUACG210AUGUU51AGCCGAUU02GGCU25AGCGC45UGGC200CGC06GGCCG40GCUGCGCGGCUA185UGCGC57GA08UGUGC150CGAUA155UAU165U58ACGAU145GCCGAUGCUA140A59UCGCGGUGC135U001GCGUAGUG501UGCCGG011UGC125GCGCGCU511AG512CAUCGUA225C1AGAG5AGUAC10UCAAG230 0 1 Reactivity
⇅ pri-mirna__cluster-3-3-2
Sample: pri-miRNA-SNP-2_WT | Reference: hsa-mir-645 | Region: full | Branches: []
CCAGCUC35AU02UUUGU25GACUC05AAAAA190GAUUAAA155AC06AUU145GAUUUUAUGCUC130U58UAGUA95CCGAGGCC071AGAAA175UCAGA081UGCGUAG022ACACG5CAUGCUG40AUC01GUAGUU51A30GCAUCGGCC54GCGCGCGUAC55G160GCU165A185UGUGCGUAGC150CGGCCGA56UGCUA140CGCGA07UGC135CGC57GUAAUCG110A08UGCGCCGCG105GC125GCGCGCU511AUG120CGAUGCAU100C09GCGGCGC205C002GG512CAUCGUA225C1AGAA195AAAUUG210AUCAAG230 0 1 Reactivity
⇅ profile_clustered-3-x_m-ratio-q0
Sample: pri-miRNA-SNP-2_WT | Reference: hsa-mir-645 | Region: pri-mirna | Branches: []